Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX38352.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
EEX38351.1
Hypothetical protein.
 
  
 0.968
EEX38353.1
Putative membrane protein.
 
   
 0.906
EEX36540.1
Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
    0.744
EEX38345.1
ABC-type metal ion transport system component/surface adhesin.
 
     0.682
EEX38342.1
TonB-dependent receptor; Most likely function alternative not yet resolved; outer membrane receptor for ferrienterochelin and colicins.
 
     0.481
EEX37138.1
Ferric siderophore transport system binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
    0.436
EEX37358.1
Hypothetical protein.
  
     0.435
EEX38349.1
Hypothetical protein.
       0.428
EEX38348.1
Putative adhesion protein; Belongs to the bacterial solute-binding protein 9 family.
 
     0.423
EEX37139.1
tPR domain protein putative component of TonB system.
 
     0.412
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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