Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX37501.1 | EEX38356.1 | VIB_001626 | VIB_000301 | Hypothetical protein. | Multimodular transpeptidase-transglycosylase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.882 |
| EEX37982.1 | EEX38356.1 | VIB_002116 | VIB_000301 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Multimodular transpeptidase-transglycosylase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.679 |
| EEX37982.1 | ftsI | VIB_002116 | VIB_001970 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division protein FtsI [Peptidoglycan synthetase]; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.882 |
| EEX37982.1 | mltG | VIB_002116 | VIB_001610 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.587 |
| EEX37982.1 | mrdA | VIB_002116 | VIB_001738 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Penicillin-binding protein 2 (PBP-2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.964 |
| EEX37982.1 | murG | VIB_002116 | VIB_001964 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.666 |
| EEX38100.1 | EEX38133.1 | VIB_000470 | VIB_000503 | Cell division protein FtsN putative. | Multimodular transpeptidase-transglycosylase. | 0.402 |
| EEX38100.1 | EEX38356.1 | VIB_000470 | VIB_000301 | Cell division protein FtsN putative. | Multimodular transpeptidase-transglycosylase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.903 |
| EEX38100.1 | ftsI | VIB_000470 | VIB_001970 | Cell division protein FtsN putative. | Cell division protein FtsI [Peptidoglycan synthetase]; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.906 |
| EEX38100.1 | mrdA | VIB_000470 | VIB_001738 | Cell division protein FtsN putative. | Penicillin-binding protein 2 (PBP-2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.625 |
| EEX38133.1 | EEX38100.1 | VIB_000503 | VIB_000470 | Multimodular transpeptidase-transglycosylase. | Cell division protein FtsN putative. | 0.402 |
| EEX38133.1 | EEX38356.1 | VIB_000503 | VIB_000301 | Multimodular transpeptidase-transglycosylase. | Multimodular transpeptidase-transglycosylase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.824 |
| EEX38133.1 | ftsI | VIB_000503 | VIB_001970 | Multimodular transpeptidase-transglycosylase. | Cell division protein FtsI [Peptidoglycan synthetase]; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.655 |
| EEX38133.1 | mltG | VIB_000503 | VIB_001610 | Multimodular transpeptidase-transglycosylase. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.540 |
| EEX38133.1 | mrdA | VIB_000503 | VIB_001738 | Multimodular transpeptidase-transglycosylase. | Penicillin-binding protein 2 (PBP-2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.735 |
| EEX38133.1 | murG | VIB_000503 | VIB_001964 | Multimodular transpeptidase-transglycosylase. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.478 |
| EEX38355.1 | EEX38356.1 | VIB_000300 | VIB_000301 | Hypothetical protein. | Multimodular transpeptidase-transglycosylase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.716 |
| EEX38355.1 | EEX38357.1 | VIB_000300 | VIB_000302 | Hypothetical protein. | ATP-dependent helicase HrpB. | 0.709 |
| EEX38355.1 | murG | VIB_000300 | VIB_001964 | Hypothetical protein. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.597 |
| EEX38356.1 | EEX37501.1 | VIB_000301 | VIB_001626 | Multimodular transpeptidase-transglycosylase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Hypothetical protein. | 0.882 |
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