STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38364.1ABC-type multidrug transport system permease component. (256 aa)    
Predicted Functional Partners:
EEX38365.1
ABC-type multidrug transport system ATPase component.
 
 0.988
EEX36913.1
ABC transporter ATP-binding protein.
  
 
 0.746
EEX37294.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.715
EEX36528.1
NADPH-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.669
EEX38366.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.508
EEX36362.1
CAAX amino terminal protease family.
  
  
 0.490
EEX38233.1
Uncharacterized ABC transporter permease component YrbE.
    
  0.438
EEX37061.1
ABC-type dipeptide transport system component.
  
  
  0.432
ugpE
SN-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.421
EEX38227.1
Lipopolysaccharide ABC transporter ATP-binding protein LptB.
   
  0.414
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.