STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38380.1Type 4 fimbrial assembly ATPase PilB. (562 aa)    
Predicted Functional Partners:
EEX38381.1
Type 4 fimbrial assembly protein PilC.
 
 
 0.988
EEX38040.1
General secretion pathway protein F.
 
 
 0.959
EEX37990.1
MSHA biogenesis protein MshG.
 
 
 0.958
EEX38382.1
Leader peptidase (Prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.931
EEX38043.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.916
EEX38379.1
Type IV pilin PilA; Belongs to the N-Me-Phe pilin family.
 
  
 0.869
EEX37997.1
MSHA biogenesis protein MshI.
  
 
 0.824
EEX38137.1
Type IV pilus biogenesis protein PilQ.
 
 
 
 0.817
EEX38134.1
Hypothetical protein.
 
 
 
 0.795
EEX38041.1
General secretion pathway protein G.
 
 0.755
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.