STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38391.1Type I secretion TolC precursor. (437 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein macB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.910
EEX37622.1
Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.870
EEX35841.1
Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.850
EEX35842.1
RND multidrug efflux transporter; Most likely function alternative not yet resolved; acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.818
EEX37621.1
RND multidrug efflux transporter; Most likely function alternative not yet resolved; acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.811
EEX37242.1
Macrolide-specific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.766
EEX35942.1
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.766
EEX38465.1
Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.744
EEX37036.1
Probable Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.735
EEX37037.1
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.708
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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