Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX36678.1 | EEX37953.1 | VIB_000783 | VIB_002085 | Hypothetical protein; Belongs to the UPF0115 family. | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.452 |
| EEX36678.1 | EEX38425.1 | VIB_000783 | VIB_000371 | Hypothetical protein; Belongs to the UPF0115 family. | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.496 |
| EEX36733.1 | EEX36908.1 | VIB_000839 | VIB_001015 | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | 0.649 |
| EEX36733.1 | EEX38425.1 | VIB_000839 | VIB_000371 | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.419 |
| EEX36733.1 | erpA | VIB_000839 | VIB_000266 | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Probable iron binding protein from the HesB_IscA_SufA family; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.638 |
| EEX36733.1 | nfuA | VIB_000839 | VIB_000418 | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | Protein gntY; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.862 |
| EEX36908.1 | EEX36733.1 | VIB_001015 | VIB_000839 | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.649 |
| EEX36908.1 | EEX38425.1 | VIB_001015 | VIB_000371 | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.655 |
| EEX36908.1 | nfuA | VIB_001015 | VIB_000418 | Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. | Protein gntY; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.643 |
| EEX37570.1 | EEX38249.1 | VIB_001695 | VIB_000623 | Bacteriocin production protein. | DNA polymerase III chi subunit. | 0.530 |
| EEX37570.1 | EEX38425.1 | VIB_001695 | VIB_000371 | Bacteriocin production protein. | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.459 |
| EEX37953.1 | EEX36678.1 | VIB_002085 | VIB_000783 | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Hypothetical protein; Belongs to the UPF0115 family. | 0.452 |
| EEX37953.1 | EEX38425.1 | VIB_002085 | VIB_000371 | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.447 |
| EEX37953.1 | erpA | VIB_002085 | VIB_000266 | Hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Probable iron binding protein from the HesB_IscA_SufA family; Required for insertion of 4Fe-4S clusters for at least IspG. | 0.442 |
| EEX38249.1 | EEX37570.1 | VIB_000623 | VIB_001695 | DNA polymerase III chi subunit. | Bacteriocin production protein. | 0.530 |
| EEX38249.1 | EEX38425.1 | VIB_000623 | VIB_000371 | DNA polymerase III chi subunit. | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.410 |
| EEX38424.1 | EEX38425.1 | VIB_000370 | VIB_000371 | Hypothetical protein. | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.582 |
| EEX38424.1 | nfuA | VIB_000370 | VIB_000418 | Hypothetical protein. | Protein gntY; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.472 |
| EEX38425.1 | EEX36678.1 | VIB_000371 | VIB_000783 | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | Hypothetical protein; Belongs to the UPF0115 family. | 0.496 |
| EEX38425.1 | EEX36733.1 | VIB_000371 | VIB_000839 | Glycine cleavage T-protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.419 |
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