STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38439.1Glycosyltransferase. (348 aa)    
Predicted Functional Partners:
EEX38438.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
       0.666
EEX36336.1
Isochorismatase of siderophore biosynthesis.
  
  
 0.664
EEX36330.1
Non-ribosomal peptide synthetase modules and related protein.
     
 0.654
EEX36281.1
Spindolin-related protein.
   
  
 0.628
EEX38437.1
long-chain-fatty-acid--CoA ligase.
       0.606
EEX36215.1
Chitinase.
  
  
 0.546
EEX37715.1
Chitinase.
  
    0.489
EEX36059.1
Chitodextrinase precursor.
   
  
 0.481
EEX36654.1
Hypothetical protein.
  
     0.446
EEX35614.1
Regulator of sigma D; Belongs to the Rsd/AlgQ family.
  
     0.444
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.