STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX38024.1Nitrogen regulation protein NR(II). (348 aa)    
Predicted Functional Partners:
ntrC
Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
 0.996
EEX36582.1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 0.984
EEX38339.1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
  
 0.952
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
   
 0.932
EEX37815.1
Aerobic respiration control sensor protein ArcB.
 
 
0.924
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
 
 
 0.915
EEX36663.1
Flagellar regulatory protein FleQ.
 
 0.896
EEX37159.1
Sigma-54 dependent response regulator.
 
 0.888
EEX35658.1
Multi-sensor hybrid histidine kinase.
   
 0.882
EEX38405.1
BarA sensory histidine kinase.
   
 0.866
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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