STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38037.1General secretion pathway protein C. (294 aa)    
Predicted Functional Partners:
EEX38038.1
General secretion pathway protein D precursor (Cholera toxin secretion protein epsD).
 
 
 0.995
EEX37994.1
Type II secretory pathway component PulD; COG1450.
 
 
 0.952
EEX38043.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.861
EEX38041.1
General secretion pathway protein G.
 
  
 0.860
EEX38042.1
General secretion pathway protein K.
 
  
 0.855
EEX38040.1
General secretion pathway protein F.
 
  
 0.830
EEX38045.1
General secretion pathway protein N.
 
   
 0.799
EEX37471.1
Membrane protein.
 
     0.757
EEX38039.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.740
EEX38044.1
General secretion pathway protein M.
 
   
 0.714
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.