Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX38040.1General secretion pathway protein F. (406 aa)    
Predicted Functional Partners:
EEX38039.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.990
EEX38041.1
General secretion pathway protein G.
 
  
 0.983
EEX38038.1
General secretion pathway protein D precursor (Cholera toxin secretion protein epsD).
 
  
 0.970
EEX38380.1
Type 4 fimbrial assembly ATPase PilB.
 
 
 0.959
EEX37991.1
MSHA biogenesis protein MshE.
 
 
 0.952
EEX38037.1
General secretion pathway protein C.
 
  
 0.911
EEX38382.1
Leader peptidase (Prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.890
EEX38043.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.848
EEX38042.1
General secretion pathway protein K.
 
   
 0.830
EEX37943.1
Twitching motility protein PilT.
 
  
 0.807
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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