STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX38045.1General secretion pathway protein N. (252 aa)    
Predicted Functional Partners:
EEX38044.1
General secretion pathway protein M.
 
   
 0.962
EEX38043.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.932
EEX38037.1
General secretion pathway protein C.
 
   
 0.911
EEX38042.1
General secretion pathway protein K.
 
   
 0.864
EEX38038.1
General secretion pathway protein D precursor (Cholera toxin secretion protein epsD).
 
   
 0.779
EEX36762.1
Hypothetical protein.
  
     0.763
EEX37523.1
ATPase involved in DNA repair.
  
     0.757
EEX38594.1
Hypothetical protein.
  
     0.756
EEX37149.1
Type IIA topoisomerase B subunit.
  
     0.742
EEX37254.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.