STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38134.1Hypothetical protein. (335 aa)    
Predicted Functional Partners:
EEX37997.1
MSHA biogenesis protein MshI.
  
 0.984
EEX38137.1
Type IV pilus biogenesis protein PilQ.
 
 
 0.972
EEX38136.1
Type IV pilus biogenesis protein PilP.
 
 
 0.957
EEX35665.1
LysM domain-containing protein.
  
 
   0.935
EEX38381.1
Type 4 fimbrial assembly protein PilC.
 
 
 
 0.859
EEX37990.1
MSHA biogenesis protein MshG.
 
 
 
 0.810
EEX37943.1
Twitching motility protein PilT.
 
   
 0.802
EEX38380.1
Type 4 fimbrial assembly ATPase PilB.
 
 
 
 0.795
EEX38382.1
Leader peptidase (Prepilin peptidase)/N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.790
EEX37942.1
Type IV pilus (Tfp) assembly protein ATPase component PilU.
  
  
 0.788
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.