STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38151.1Phosphoribulokinase. (289 aa)    
Predicted Functional Partners:
EEX38142.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.765
EEX38152.1
Hypothetical protein; Belongs to the UPF0270 family.
       0.589
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.578
EEX38157.1
Putative cytoplasmic protein, probably associated with Glutathione-regulated potassium-efflux.
 
     0.491
EEX38150.1
Cyclic AMP receptor protein.
       0.480
EEX38153.1
Alpha/beta fold family hydrolase; Functionally coupled to phosphoribulokinase.
     
 0.478
EEX38154.1
Hypothetical protein.
       0.443
EEX36347.1
Transcriptional regulator substrate-binding of LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
   
 0.423
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.