STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38224.1Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); COG1762. (150 aa)    
Predicted Functional Partners:
EEX38222.1
Phosphocarrier protein nitrogen regulation associated.
 
 
 0.995
EEX38225.1
Ribosome hibernation protein YhbH.
 
  
 0.975
EEX38223.1
Hypothetical protein; Displays ATPase and GTPase activities.
  
  
 0.969
EEX35969.1
Phosphotransferase system fructose-specific IIB and IIC subunit.
 
 0.946
EEX38226.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.927
EEX36268.1
Phosphotransferase system mannitol-specific.
 
 
 0.915
EEX37599.1
Phosphocarrier protein of PTS system.
 
 
 0.910
EEX35968.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.895
EEX35717.1
Phosphotransferase system fructose-specific.
 
0.880
EEX35715.1
Putative PTS system nitrogen regulatory IIA component.
  
 
 0.872
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.