STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38225.1Ribosome hibernation protein YhbH. (95 aa)    
Predicted Functional Partners:
EEX38224.1
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); COG1762.
 
  
 0.946
rpsU
SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.915
rpmI
LSU ribosomal protein L35p; Belongs to the bacterial ribosomal protein bL35 family.
 
 
   0.913
rpsI
SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family.
   
 
 0.910
rpmA
LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.910
rpmG
LSU ribosomal protein L33p; Belongs to the bacterial ribosomal protein bL33 family.
   
   0.910
rpmB
LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.
   
   0.910
rpsE
SSU ribosomal protein S5p (S2e); Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 
 0.909
rpmH
LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.
   
 
 0.909
rpmC
LSU ribosomal protein L29p (L35e); Belongs to the universal ribosomal protein uL29 family.
    
 
 0.908
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.