STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38231.1Inner membrane protein, predicted calcium/sodium:proton antiporter. (321 aa)    
Predicted Functional Partners:
EEX38229.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
  
  
 0.791
EEX38230.1
Arabinose 5-phosphate isomerase.
     
 0.785
EEX36921.1
Arsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family.
   
   0.526
EEX37212.1
Arsenical pump-driving ATPase.
   
   0.526
EEX36959.1
Oxidoreductase short-chain dehydrogenase/reductase family.
    
   0.443
EEX37588.1
Oxidoreductase short-chain dehydrogenase/reductase family.
    
   0.443
EEX36960.1
Amine oxidase flavin-containing.
   
    0.436
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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