STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38232.1Uncharacterized ABC transporter ATP-binding protein YrbF. (219 aa)    
Predicted Functional Partners:
EEX38233.1
Uncharacterized ABC transporter permease component YrbE.
 
 0.999
EEX38234.1
Uncharacterized ABC transporter, periplasmic component YrbD.
 
 0.997
EEX37129.1
Hypothetical protein.
   
  0.962
EEX38235.1
Uncharacterized ABC transporter auxiliary component YrbC.
 
 
 0.937
EEX36722.1
Chemotaxis response - phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
  
  0.643
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
  
  
 
0.578
EEX37294.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.483
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.461
EEX38365.1
ABC-type multidrug transport system ATPase component.
    
 
0.446
EEX36913.1
ABC transporter ATP-binding protein.
    
  0.446
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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