STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38233.1Uncharacterized ABC transporter permease component YrbE. (263 aa)    
Predicted Functional Partners:
EEX38232.1
Uncharacterized ABC transporter ATP-binding protein YrbF.
 
 0.999
EEX38234.1
Uncharacterized ABC transporter, periplasmic component YrbD.
 
 0.999
EEX38235.1
Uncharacterized ABC transporter auxiliary component YrbC.
 
 
 0.987
EEX37129.1
Hypothetical protein.
   
 0.915
EEX38227.1
Lipopolysaccharide ABC transporter ATP-binding protein LptB.
 
  
  0.732
EEX37200.1
Paraquat-inducible protein B.
    
 0.717
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.645
EEX38236.1
BolA/YrbA family protein; Belongs to the BolA/IbaG family.
       0.642
EEX36729.1
Surface lipoprotein VacJ.
 
   
 0.622
EEX38238.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.609
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.