STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38234.1Uncharacterized ABC transporter, periplasmic component YrbD. (148 aa)    
Predicted Functional Partners:
EEX38232.1
Uncharacterized ABC transporter ATP-binding protein YrbF.
 
 0.999
EEX38233.1
Uncharacterized ABC transporter permease component YrbE.
 
 0.999
EEX38235.1
Uncharacterized ABC transporter auxiliary component YrbC.
 
 0.999
EEX37129.1
Hypothetical protein.
  
 0.909
EEX36729.1
Surface lipoprotein VacJ.
 
   
 0.870
EEX37640.1
Flagellar motor rotation protein MotB.
   
   0.750
EEX37200.1
Paraquat-inducible protein B.
     
 0.737
EEX38236.1
BolA/YrbA family protein; Belongs to the BolA/IbaG family.
     
 0.705
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.668
EEX38238.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.629
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.