STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38234.1Uncharacterized ABC transporter, periplasmic component YrbD. (148 aa)    
Predicted Functional Partners:
EEX38233.1
Uncharacterized ABC transporter permease component YrbE.
 
 0.998
EEX38232.1
Uncharacterized ABC transporter ATP-binding protein YrbF.
 
 0.997
EEX38235.1
Uncharacterized ABC transporter auxiliary component YrbC.
 
 0.991
EEX37129.1
Hypothetical protein.
  
  0.962
EEX37640.1
Flagellar motor rotation protein MotB.
   
   0.878
EEX36729.1
Surface lipoprotein VacJ.
 
   
 0.811
EEX36722.1
Chemotaxis response - phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
  
  0.649
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
  0.604
ftsE
Cell division transporter ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
    
  0.540
pal
Peptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
  0.540
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.