Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX35601.1 | EEX35665.1 | VIB_003080 | VIB_003034 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | LysM domain-containing protein. | 0.761 |
| EEX35601.1 | EEX36587.1 | VIB_003080 | VIB_000688 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Membrane-bound lytic murein transglycosylase D precursor. | 0.887 |
| EEX35601.1 | EEX36618.1 | VIB_003080 | VIB_000723 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.777 |
| EEX35601.1 | EEX37948.1 | VIB_003080 | VIB_002080 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific); Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.635 |
| EEX35601.1 | adk | VIB_003080 | VIB_001709 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.608 |
| EEX35601.1 | guaA | VIB_003080 | VIB_001846 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.912 |
| EEX35601.1 | tmk | VIB_003080 | VIB_001609 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.536 |
| EEX35601.1 | trpC | VIB_003080 | VIB_001485 | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Belongs to the TrpC family. | 0.540 |
| EEX35665.1 | EEX35601.1 | VIB_003034 | VIB_003080 | LysM domain-containing protein. | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | 0.761 |
| EEX35665.1 | EEX36587.1 | VIB_003034 | VIB_000688 | LysM domain-containing protein. | Membrane-bound lytic murein transglycosylase D precursor. | 0.697 |
| EEX35665.1 | guaA | VIB_003034 | VIB_001846 | LysM domain-containing protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.795 |
| EEX36321.1 | EEX36587.1 | VIB_002636 | VIB_000688 | Chemotaxis protein CheC -- inhibitor of MCP methylation. | Membrane-bound lytic murein transglycosylase D precursor. | 0.706 |
| EEX36321.1 | EEX36618.1 | VIB_002636 | VIB_000723 | Chemotaxis protein CheC -- inhibitor of MCP methylation. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.872 |
| EEX36321.1 | EEX36659.1 | VIB_002636 | VIB_000764 | Chemotaxis protein CheC -- inhibitor of MCP methylation. | Flagellar hook-associated protein FliD. | 0.970 |
| EEX36587.1 | EEX35601.1 | VIB_000688 | VIB_003080 | Membrane-bound lytic murein transglycosylase D precursor. | N-acetylmuramoyl-L-alanine amidase AmiB precursor. | 0.887 |
| EEX36587.1 | EEX35665.1 | VIB_000688 | VIB_003034 | Membrane-bound lytic murein transglycosylase D precursor. | LysM domain-containing protein. | 0.697 |
| EEX36587.1 | EEX36321.1 | VIB_000688 | VIB_002636 | Membrane-bound lytic murein transglycosylase D precursor. | Chemotaxis protein CheC -- inhibitor of MCP methylation. | 0.706 |
| EEX36587.1 | EEX36618.1 | VIB_000688 | VIB_000723 | Membrane-bound lytic murein transglycosylase D precursor. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.904 |
| EEX36587.1 | EEX36659.1 | VIB_000688 | VIB_000764 | Membrane-bound lytic murein transglycosylase D precursor. | Flagellar hook-associated protein FliD. | 0.695 |
| EEX36587.1 | EEX37948.1 | VIB_000688 | VIB_002080 | Membrane-bound lytic murein transglycosylase D precursor. | Nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific); Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.714 |
page 1 of 3