STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36607.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
EEX36608.1
Hypothetical protein.
 
  
 0.967
EEX36606.1
Hypothetical protein.
 
   
 0.966
EEX36592.1
Hypothetical protein.
 
  
  0.793
EEX37523.1
ATPase involved in DNA repair.
  
   
 0.773
EEX38201.1
Hypothetical protein.
  
     0.767
EEX38161.1
Sodium-type polar flagellar protein MotX.
  
   
 0.756
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
  0.751
EEX37254.1
Hypothetical protein.
  
     0.751
EEX37139.1
tPR domain protein putative component of TonB system.
 
  
  0.749
EEX36728.1
ATPase involved in DNA repair.
  
     0.744
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.