STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36640.1Trp repressor-binding protein; Belongs to the WrbA family. (193 aa)    
Predicted Functional Partners:
EEX36641.1
Arsenate reductase.
  
    0.837
EEX38613.1
Non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase; Belongs to the Dps family.
  
  
 0.661
EEX36170.1
Non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase; Belongs to the Dps family.
  
  
 0.661
EEX35665.1
LysM domain-containing protein.
   
  
 0.661
EEX38155.1
Glutathione-regulated potassium-efflux system ancillary protein KefG.
    
 0.653
EEX36839.1
Serine protein kinase.
   
    0.631
bioC
Biotin synthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.
  
  
  0.548
EEX36642.1
Zinc metalloprotease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
       0.516
EEX37031.1
NAD(P)-binding protein.
    
  0.488
EEX37281.1
Nucleoside-diphosphate-sugar epimerase.
    
  0.488
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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