STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36640.1Trp repressor-binding protein; Belongs to the WrbA family. (193 aa)    
Predicted Functional Partners:
EEX36641.1
Arsenate reductase.
  
    0.874
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.866
EEX36642.1
Zinc metalloprotease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
  
    0.695
EEX36839.1
Serine protein kinase.
   
    0.657
EEX38613.1
Non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase; Belongs to the Dps family.
  
  
 0.650
EEX36170.1
Non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase; Belongs to the Dps family.
  
  
 0.650
EEX35665.1
LysM domain-containing protein.
   
  
 0.625
EEX36643.1
Permease PerM.
       0.581
EEX36766.1
2,4-dienoyl-CoA reductase [NADPH].
    
 0.537
EEX38155.1
Glutathione-regulated potassium-efflux system ancillary protein KefG.
    
 0.536
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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