Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX36392.1 | EEX37268.1 | VIB_002707 | VIB_001388 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | 0.882 |
| EEX36392.1 | EEX37340.1 | VIB_002707 | VIB_001460 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | 0.928 |
| EEX36392.1 | dapE | VIB_002707 | VIB_000756 | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | N-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.802 |
| EEX36650.1 | EEX36652.1 | VIB_000755 | VIB_000757 | D,D-carboxypeptidase-related protein. | A glutathione-dependent thiol reductase; Belongs to the ArsC family. | 0.800 |
| EEX36650.1 | dapE | VIB_000755 | VIB_000756 | D,D-carboxypeptidase-related protein. | N-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.800 |
| EEX36652.1 | EEX36650.1 | VIB_000757 | VIB_000755 | A glutathione-dependent thiol reductase; Belongs to the ArsC family. | D,D-carboxypeptidase-related protein. | 0.800 |
| EEX36652.1 | dapE | VIB_000757 | VIB_000756 | A glutathione-dependent thiol reductase; Belongs to the ArsC family. | N-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.832 |
| EEX36666.1 | dapE | VIB_000771 | VIB_000756 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | N-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.738 |
| EEX37268.1 | EEX36392.1 | VIB_001388 | VIB_002707 | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | 0.882 |
| EEX37268.1 | EEX37340.1 | VIB_001388 | VIB_001460 | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | 0.882 |
| EEX37268.1 | argA | VIB_001388 | VIB_001901 | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | Acetylglutamate kinase; COG0548. | 0.463 |
| EEX37268.1 | argC | VIB_001388 | VIB_000498 | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.703 |
| EEX37268.1 | argG | VIB_001388 | VIB_000500 | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.719 |
| EEX37268.1 | dapE | VIB_001388 | VIB_000756 | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | N-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.834 |
| EEX37340.1 | EEX36392.1 | VIB_001460 | VIB_002707 | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing. | 0.928 |
| EEX37340.1 | EEX37268.1 | VIB_001460 | VIB_001388 | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | 0.882 |
| EEX37340.1 | dapE | VIB_001460 | VIB_000756 | Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521. | N-succinyl-L,L-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.802 |
| argA | EEX37268.1 | VIB_001901 | VIB_001388 | Acetylglutamate kinase; COG0548. | Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase. | 0.463 |
| argA | argC | VIB_001901 | VIB_000498 | Acetylglutamate kinase; COG0548. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.986 |
| argA | argG | VIB_001901 | VIB_000500 | Acetylglutamate kinase; COG0548. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.983 |
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