Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX36692.1Flavodoxin 1; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (175 aa)    
Predicted Functional Partners:
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
 
   
 0.801
seqA
SeqA protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
 
  
 0.734
EEX36693.1
Putative esterase/lipase YbfF.
       0.721
EEX36336.1
Isochorismatase of siderophore biosynthesis.
   
    0.675
EEX36321.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
    
   0.648
EEX36695.1
Phosphoglucomutase.
     
 0.647
fur
Ferric uptake regulation protein FUR; Belongs to the Fur family.
  
  
 0.544
EEX36337.1
2,3-dihydroxybenzoate-AMP ligase.
   
    0.450
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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