Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX36710.1Signal transduction histidine kinase. (1106 aa)    
Predicted Functional Partners:
EEX36202.1
Hypothetical protein.
  
 
   0.784
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
 0.782
EEX37817.1
Glutamate synthase [NADPH] large chain.
    
 0.769
EEX36584.1
Autoinducer 1 sensor kinase/phosphatase luxN.
 
 
 0.752
EEX36244.1
Transcriptional regulator AraC/XylS family.
  
     0.744
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
     0.727
EEX35716.1
Putative ARAC-type regulatory protein.
  
     0.727
EEX38033.1
Hypothetical protein.
  
     0.726
EEX37327.1
Hypothetical protein.
  
     0.719
EEX36873.1
Hypothetical protein; Belongs to the UPF0149 family.
  
     0.703
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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