STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36754.1Osmosensitive K+ channel histidine kinase KdpD. (483 aa)    
Predicted Functional Partners:
EEX36755.1
DNA-binding response regulator KdpE.
 0.976
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
 
0.928
EEX37815.1
Aerobic respiration control sensor protein ArcB.
 
0.927
EEX35659.1
Signal transduction histidine kinase.
 
0.922
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
 
0.903
EEX38406.1
DNA-binding response regulator KdpE.
 0.898
EEX38405.1
BarA sensory histidine kinase.
 
0.897
EEX37418.1
DNA-binding response regulator KdpE.
 0.891
EEX38344.1
Putative transcriptional regulator CpxR.
 
 0.886
EEX38086.1
Transcriptional regulator CpxR.
 0.878
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.