Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36757.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
EEX36758.1
Uncharacterized iron-regulated protein.
       0.678
EEX36759.1
rRNA (guanine-N1-)-methyltransferase.
       0.636
EEX36760.1
Aldose 1-epimerase-related protein; Belongs to the glucose-6-phosphate 1-epimerase family.
       0.602
EEX37402.1
BCCT transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.486
EEX36756.1
Nucleoprotein/polynucleotide-associated enzyme.
       0.443
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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