STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36774.1long-chain-fatty-acid--CoA ligase. (467 aa)    
Predicted Functional Partners:
EEX37452.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
 0.945
EEX36330.1
Non-ribosomal peptide synthetase modules and related protein.
 
 
0.888
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.875
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
  
 0.794
EEX36593.1
acyl-CoA dehydrogenase short-chain specific.
 
 
 0.777
rplF
LSU ribosomal protein L6p (L9e); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.774
EEX36934.1
acyl-CoA dehydrogenase short-chain specific.
 
 
 0.769
EEX37815.1
Aerobic respiration control sensor protein ArcB.
   
 0.767
EEX38405.1
BarA sensory histidine kinase.
   
 0.763
EEX36336.1
Isochorismatase of siderophore biosynthesis.
  
 
 0.748
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.