Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX36796.1Long-chain fatty acid transport protein. (428 aa)    
Predicted Functional Partners:
bamD
Probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.886
bamA
Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.861
EEX38355.1
Hypothetical protein.
  
 
 
 0.750
EEX38193.1
FKBP-type peptidyl-prolyl cis-trans isomerase FklB.
    
 
 0.658
EEX36042.1
Peptidyl-prolyl cis-trans isomerase-related protein.
    
 
 0.658
EEX35592.1
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor.
    
 
 0.658
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
   
 0.618
EEX36795.1
Long-chain fatty acid transport protein.
 
    
0.606
pal
Peptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
      
 0.576
EEX37566.1
Sodium-type flagellar protein MotY precursor.
      
 0.574
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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