STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36847.1Amino acid ABC transporter amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family. (258 aa)    
Predicted Functional Partners:
EEX36849.1
Amino acid ABC transporter permease protein.
 
 0.993
EEX36848.1
Arginine/ornithine ABC transporter permease protein AotQ.
 
 0.972
EEX36846.1
Arginine/ornithine ABC transporter ATP-binding protein AotP.
 
 
 0.954
EEX37815.1
Aerobic respiration control sensor protein ArcB.
   
 0.827
EEX38405.1
BarA sensory histidine kinase.
   
 0.793
EEX38265.1
Chorismate mutase I/cyclohexadienyl dehydrogenase.
    
 0.780
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
   
 0.778
EEX38259.1
Chorismate mutase I/prephenate dehydratase.
    
 0.759
EEX35660.1
Response regulator receiver modulated diguanylate cyclase.
    
 0.622
EEX36746.1
Metal-dependent phosphohydrolase.
 
  
  0.607
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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