Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEX36848.1Arginine/ornithine ABC transporter permease protein AotQ. (246 aa)    
Predicted Functional Partners:
EEX36849.1
Amino acid ABC transporter permease protein.
 
 
0.996
EEX36846.1
Arginine/ornithine ABC transporter ATP-binding protein AotP.
 
 
 0.995
EEX36847.1
Amino acid ABC transporter amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.994
EEX37094.1
Amino acid ABC transporter amino acid-binding protein.
 
 0.845
EEX36250.1
Putative amino acid ABC transporter amino acid-binding protein.
 
 0.636
EEX37294.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.548
EEX36153.1
Hypothetical protein.
 
 0.532
EEX36251.1
Extracellular solute-binding protein, family 3.
 
 0.520
EEX37145.1
Probable amino acid ABC transporter.
 
 0.484
EEX35828.1
Amino acid ABC transporter amino acid-binding protein.
 
 0.482
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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