Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36876.1Hypothetical protein. (930 aa)    
Predicted Functional Partners:
EEX36874.1
Hypothetical protein.
 
     0.882
EEX36059.1
Chitodextrinase precursor.
    
 
 0.814
EEX36215.1
Chitinase.
    
 
 0.814
EEX36877.1
Hypothetical protein.
       0.804
EEX36875.1
Hypothetical protein.
       0.803
EEX37815.1
Aerobic respiration control sensor protein ArcB.
   
 0.803
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
    
 0.735
EEX35821.1
ATP-dependent DNA helicase RecQ.
  
 
 0.711
parE
Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
   
 
 0.683
EEX37695.1
Possible abortive infection phage resistance protein.
   
 
 0.683
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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