STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36886.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
EEX36245.1
Proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.783
EEX37192.1
NAD-specific glutamate dehydrogenase large form.
    
  0.575
EEX37000.1
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
 
  
 0.545
EEX36766.1
2,4-dienoyl-CoA reductase [NADPH].
    
  0.531
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.488
rimK
Ribosomal protein S6 glutaminyl transferase; Belongs to the RimK family.
    
 0.472
EEX37785.1
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); COG0189.
    
 0.472
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.472
gshA
Glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
    
  0.453
EEX36884.1
Hypothetical protein.
 
     0.445
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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