STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36906.1Iron-sulfur cluster assembly protein SufD. (419 aa)    
Predicted Functional Partners:
EEX36905.1
Iron-sulfur cluster assembly ATPase protein SufC.
 
 
 0.999
EEX36904.1
Iron-sulfur cluster assembly protein SufB.
 
 
0.998
EEX36907.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.986
EEX36908.1
Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
 
 
 0.947
EEX36910.1
Sulfur acceptor protein SufE for iron-sulfur cluster assembly.
 
 
 0.905
EEX37351.1
Cysteine desulfurase.
 
 
 0.904
EEX36909.1
Predicted metal-sulfur cluster enzyme.
 
   
 0.901
EEX37772.1
Sulfur acceptor protein SufE for iron-sulfur cluster assembly.
 
 
 0.764
nfuA
Protein gntY; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.743
erpA
Probable iron binding protein from the HesB_IscA_SufA family; Required for insertion of 4Fe-4S clusters for at least IspG.
  
 
 0.617
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.