Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EEX36913.1ABC transporter ATP-binding protein. (285 aa)    
Predicted Functional Partners:
EEX36912.1
Transcriptional regulator GntR family.
 
  
 0.966
EEX36914.1
Putative membrane protein.
       0.842
EEX38364.1
ABC-type multidrug transport system permease component.
  
 
 0.709
EEX35635.1
ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the ATPase epsilon chain family.
   
   0.696
EEX37279.1
ABC-type antimicrobial peptide transport system ATPase component; COG1136.
 
  
  0.681
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.678
EEX37054.1
Putative transport system membrane protein.
    
 0.630
EEX37047.1
ABC-type multidrug transport system permease component.
  
 
 0.625
EEX37048.1
ABC-type multidrug transport system permease component.
  
 
 0.625
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 0.537
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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