Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX36939.1Glucose repressor HexR for Entner-Doudoroff pathway RpiR family. (284 aa)    
Predicted Functional Partners:
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.835
EEX36940.1
Glutamate decarboxylase eukaryotic type.
       0.668
EEX36941.1
Membrane protein.
       0.603
EEX36942.1
Predicted signal transduction protein.
       0.586
EEX38606.1
2-haloalkanoic acid dehalogenase.
 
  
  0.516
EEX35718.1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
  0.496
EEX35817.1
PTS system N-acetylmuramic acid-specific IIBC component.
  
 
 0.496
EEX38159.1
Isoaspartyl aminopeptidase; Enzyme with broad specificity; asp-X dipeptidase.
  
    0.485
EEX38458.1
PTS system maltose and glucose-specific IIBC component.
  
 
 0.481
EEX37397.1
Phosphotransferase system sucrose-specific IIBC component.
  
 
 0.481
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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