Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX36941.1Membrane protein. (301 aa)    
Predicted Functional Partners:
EEX36942.1
Predicted signal transduction protein.
       0.766
EEX36940.1
Glutamate decarboxylase eukaryotic type.
       0.689
EEX36943.1
DNA transformation protein TfoX.
 
     0.679
EEX36939.1
Glucose repressor HexR for Entner-Doudoroff pathway RpiR family.
       0.603
EEX36937.1
Glutaredoxin 1.
 
     0.586
EEX36066.1
Membrane protein.
 
     0.467
EEX38067.1
Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
  
    0.464
EEX35789.1
Lipopolysaccharide heptosyltransferase I.
  
    0.402
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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