STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36954.1Transcriptional activator MetR; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
 
   
 0.667
EEX36799.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.572
EEX37549.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.563
EEX37464.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.556
EEX36166.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.542
EEX36158.1
Transcriptional regulator; COG0583; Belongs to the LysR transcriptional regulatory family.
  
     0.522
EEX37115.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.516
EEX36344.1
Transcriptional regulator LysR family.
  
     0.492
EEX36283.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.470
EEX36442.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.463
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.