STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX36959.1Oxidoreductase short-chain dehydrogenase/reductase family. (241 aa)    
Predicted Functional Partners:
EEX36958.1
Putative transcriptional regulator.
 
  
 0.969
EEX36960.1
Amine oxidase flavin-containing.
 
   
 0.950
EEX36961.1
Hypothetical protein.
 
  
 0.945
EEX36962.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.921
EEX36963.1
Putative lipoprotein.
 
  
 0.917
EEX37817.1
Glutamate synthase [NADPH] large chain.
    
  0.851
EEX36330.1
Non-ribosomal peptide synthetase modules and related protein.
  
 
 0.777
gcvP
Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.751
EEX36774.1
long-chain-fatty-acid--CoA ligase.
   
 0.735
EEX37435.1
long-chain-fatty-acid--CoA ligase.
   
 0.735
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.