Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX36994.1 | EEX36995.1 | VIB_001103 | VIB_001104 | Membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism. | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | 0.542 |
| EEX36994.1 | EEX36996.1 | VIB_001103 | VIB_001105 | Membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism. | Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | 0.605 |
| EEX36994.1 | EEX36998.1 | VIB_001103 | VIB_001107 | Membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism. | Chromosome partition protein MukB; Belongs to the SMC family. MukB subfamily. | 0.608 |
| EEX36994.1 | mukE | VIB_001103 | VIB_001106 | Membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism. | Chromosome partition protein MukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF. | 0.603 |
| EEX36995.1 | EEX36994.1 | VIB_001104 | VIB_001103 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | Membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism. | 0.542 |
| EEX36995.1 | EEX36996.1 | VIB_001104 | VIB_001105 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | 0.859 |
| EEX36995.1 | EEX36998.1 | VIB_001104 | VIB_001107 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | Chromosome partition protein MukB; Belongs to the SMC family. MukB subfamily. | 0.833 |
| EEX36995.1 | EEX37698.1 | VIB_001104 | VIB_001823 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | Hypothetical protein. | 0.825 |
| EEX36995.1 | cmoA | VIB_001104 | VIB_001113 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.612 |
| EEX36995.1 | cmoB | VIB_001104 | VIB_001112 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | tRNA (5-methoxyuridine) 34 synthase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.645 |
| EEX36995.1 | gcvP | VIB_001104 | VIB_002339 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.783 |
| EEX36995.1 | glyA | VIB_001104 | VIB_001745 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.498 |
| EEX36995.1 | mnmC | VIB_001104 | VIB_000789 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | 5-methylaminomethyl-2-thiouridine-forming enzyme MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.745 |
| EEX36995.1 | mukE | VIB_001104 | VIB_001106 | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | Chromosome partition protein MukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF. | 0.849 |
| EEX36996.1 | EEX36994.1 | VIB_001105 | VIB_001103 | Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | Membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism. | 0.605 |
| EEX36996.1 | EEX36995.1 | VIB_001105 | VIB_001104 | Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | 0.859 |
| EEX36996.1 | EEX36998.1 | VIB_001105 | VIB_001107 | Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | Chromosome partition protein MukB; Belongs to the SMC family. MukB subfamily. | 0.996 |
| EEX36996.1 | mukE | VIB_001105 | VIB_001106 | Chromosome partition protein MukF; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | Chromosome partition protein MukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF. | 0.998 |
| EEX36998.1 | EEX36994.1 | VIB_001107 | VIB_001103 | Chromosome partition protein MukB; Belongs to the SMC family. MukB subfamily. | Membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism. | 0.608 |
| EEX36998.1 | EEX36995.1 | VIB_001107 | VIB_001104 | Chromosome partition protein MukB; Belongs to the SMC family. MukB subfamily. | S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism. | 0.833 |
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