STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37016.1Peptide transport system permease protein SapB; TC 3.A.1.5.5. (320 aa)    
Predicted Functional Partners:
EEX37014.1
Peptide transport system ATP-binding protein SapD; TC 3.A.1.5.5; Belongs to the ABC transporter superfamily.
 
 
 0.996
EEX37017.1
Peptide transport periplasmic protein SapA; TC 3.A.1.5.5.
 
  
 0.995
EEX37015.1
Peptide ABC transporter permease protein.
 
  
 0.986
EEX37013.1
Peptide transport system ATP-binding protein SapF; TC 3.A.1.5.5.
 
  
 0.972
EEX36451.1
Peptide ABC transporter permease component.
  
     0.774
EEX37390.1
Oligopeptide transport system permease protein OppC; TC 3.A.1.5.1.
  
     0.769
EEX37054.1
Putative transport system membrane protein.
  
     0.768
EEX36454.1
Oligopeptide/dipeptide ABC transporter ATPase subunit; Belongs to the ABC transporter superfamily.
  
     0.767
EEX37392.1
ABC-type oligopeptide transport system component; COG4166.
  
  
  0.762
EEX37389.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
  
     0.760
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.