STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37025.1ABC transporter substrate-binding protein YnjB. (381 aa)    
Predicted Functional Partners:
EEX37024.1
ABC transporter permease protein YnjC.
 
 
 0.975
EEX37022.1
Putative cytochrome oxidase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.952
EEX37023.1
ABC transporter ATP-binding protein YnjD.
 
   
 0.924
EEX36348.1
Dihydrolipoamide dehydrogenase.
 
  
 0.719
EEX37174.1
Spermidine putrescine ABC transporter permease component PotC; TC_3.A.1.11.1.
    
  0.622
EEX37175.1
Spermidine putrescine ABC transporter permease component PotB; TC_3.A.1.11.1.
    
  0.622
EEX37026.1
Heat shock protein HslJ.
       0.498
EEX37124.1
SN-glycerol-3-phosphate transport system permease protein UgpA; TC 3.A.1.1.3.
 
  
  0.492
EEX37294.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.487
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
    
  0.444
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.