Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEX37026.1Heat shock protein HslJ. (147 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein macB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
   0.837
EEX37022.1
Putative cytochrome oxidase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.683
EEX37023.1
ABC transporter ATP-binding protein YnjD.
       0.683
EEX37024.1
ABC transporter permease protein YnjC.
       0.683
EEX37025.1
ABC transporter substrate-binding protein YnjB.
       0.683
EEX38391.1
Type I secretion TolC precursor.
    
   0.540
EEX37049.1
Outer membrane protein.
    
   0.540
EEX37244.1
Outer membrane protein of RND family multidrug efflux pump.
    
   0.540
EEX35943.1
Outer membrane protein.
    
   0.540
EEX35944.1
Hypothetical protein.
    
   0.520
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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