STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuDVitamin B12 ABC transporter ATPase component BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. (251 aa)    
Predicted Functional Partners:
btuC
Vitamin B12 import system permease protein btuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
 
 
 0.999
btuF
Vitamin B12 ABC transporter B12-binding component BtuF; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
  
 
 0.983
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
       0.815
EEX37279.1
ABC-type antimicrobial peptide transport system ATPase component; COG1136.
  
     0.751
EEX37156.1
ABC-type tungstate transport system ATP-binding protein.
  
     0.697
EEX37056.1
ABC transporter ATP binding protein.
  
     0.652
EEX36096.1
Hemin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
  0.650
EEX35939.1
Putative periplasmic iron/siderophore binding protein.
    
 0.634
EEX35940.1
Periplasmic binding protein.
    
 0.634
EEX36333.1
Ferric enterobactin transport system permease protein fepD; TC 3.A.1.14.2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
  0.577
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.