STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37042.1Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. (289 aa)    
Predicted Functional Partners:
EEX37934.1
Iron-regulated virulence regulatory protein IrgB; Belongs to the LysR transcriptional regulatory family.
  
     0.706
EEX37115.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.688
EEX37292.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.678
EEX37041.1
Permease of the major facilitator superfamily.
 
     0.676
EEX36166.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.660
EEX37464.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.630
EEX38438.1
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.482
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.436
EEX36244.1
Transcriptional regulator AraC/XylS family.
  
    0.415
EEX37420.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.405
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.