Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX37056.1ABC transporter ATP binding protein. (273 aa)    
Predicted Functional Partners:
EEX37054.1
Putative transport system membrane protein.
 
 
 0.989
EEX36451.1
Peptide ABC transporter permease component.
 
 0.922
EEX37390.1
Oligopeptide transport system permease protein OppC; TC 3.A.1.5.1.
 
 0.919
EEX37057.1
ABC transporter ATP-binding protein.
 
 
 
0.902
EEX37063.1
ABC-type dipeptide/oligopeptide/nickel transport system permease component.
 
 0.887
EEX38328.1
Peptide ABC transporter permease component.
 
 0.868
EEX35836.1
Peptide ABC transporter permease component.
 
 0.862
EEX37055.1
Putative ABC transporter substrate-binding protein.
  
 
 0.838
EEX36452.1
Peptide ABC transporter permease component.
 
 
 0.755
EEX38327.1
Peptide ABC transporter permease protein.
 
 
 0.741
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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