STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37092.1tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system. (109 aa)    
Predicted Functional Partners:
EEX35590.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD.
 
 
 0.936
EEX35589.1
Uncharacterized conserved protein involved in oxidation of intracellular sulfur.
  
 
 0.802
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.744
EEX37093.1
Putative TEGT family carrier/transport protein; Belongs to the BI1 family.
     
 0.580
EEX37340.1
Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521.
   
 
 0.527
EEX36392.1
Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing.
   
 
 0.527
EEX36823.1
NADH dehydrogenase.
    
 0.466
EEX36229.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.466
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.