STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX37119.1Homogentisate 1,2-dioxygenase. (380 aa)    
Predicted Functional Partners:
EEX37118.1
4-hydroxyphenylpyruvate dioxygenase.
 
 0.998
EEX37121.1
Maleylacetoacetate isomerase/glutathione S-transferase.
 
 
 0.982
EEX37120.1
2-keto-4-pentenoate hydratase.
 
  
 0.979
EEX36445.1
Phenylalanine-4-hydroxylase.
 
  
 0.927
EEX35851.1
Maleylacetoacetate isomerase/glutathione S-transferase.
 
 
 0.789
EEX36388.1
2-keto-4-pentenoate hydratase.
  
  
 0.733
EEX36446.1
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.641
EEX35899.1
Inosose dehydratase.
     
 0.639
aroE
Shikimate 5-dehydrogenase I alpha; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
     
 0.631
EEX37268.1
Diaminobutyrate-pyruvate transaminase/L-2,4-diaminobutyrate decarboxylase.
   
  
 0.510
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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