Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX37129.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
EEX36239.1
Che cluster related two-component response regulator.
  
 0.983
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
 
 0.960
EEX38232.1
Uncharacterized ABC transporter ATP-binding protein YrbF.
   
 0.925
EEX38405.1
BarA sensory histidine kinase.
  
 
 0.918
EEX38233.1
Uncharacterized ABC transporter permease component YrbE.
   
 0.915
EEX38234.1
Uncharacterized ABC transporter, periplasmic component YrbD.
  
 0.909
EEX35660.1
Response regulator receiver modulated diguanylate cyclase.
  
 
 0.907
EEX36616.1
Flagellar hook protein FlgE.
   
    0.904
EEX36621.1
Flagellar protein FlgJ.
   
    0.904
EEX36613.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.896
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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