Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX35652.1 | EEX35964.1 | VIB_003021 | VIB_002276 | DNA polymerase III beta subunit. | Exonuclease SbcC. | 0.463 |
EEX35652.1 | EEX36850.1 | VIB_003021 | VIB_000957 | DNA polymerase III beta subunit. | Exodeoxyribonuclease III. | 0.929 |
EEX35652.1 | EEX37140.1 | VIB_003021 | VIB_001254 | DNA polymerase III beta subunit. | ATP-dependent DNA ligase. | 0.986 |
EEX35652.1 | EEX37325.1 | VIB_003021 | VIB_001445 | DNA polymerase III beta subunit. | DNA polymerase II. | 0.991 |
EEX35652.1 | EEX37483.1 | VIB_003021 | VIB_001608 | DNA polymerase III beta subunit. | DNA polymerase III delta prime subunit. | 0.994 |
EEX35652.1 | polA | VIB_003021 | VIB_000051 | DNA polymerase III beta subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.988 |
EEX35652.1 | xni | VIB_003021 | VIB_001760 | DNA polymerase III beta subunit. | Probable exodeoxyribonuclease IX; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. | 0.968 |
EEX35748.1 | EEX35964.1 | VIB_002897 | VIB_002276 | Metallo-beta-lactamase family protein RNA-specific. | Exonuclease SbcC. | 0.498 |
EEX35748.1 | EEX37140.1 | VIB_002897 | VIB_001254 | Metallo-beta-lactamase family protein RNA-specific. | ATP-dependent DNA ligase. | 0.762 |
EEX35748.1 | polA | VIB_002897 | VIB_000051 | Metallo-beta-lactamase family protein RNA-specific. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.741 |
EEX35964.1 | EEX35652.1 | VIB_002276 | VIB_003021 | Exonuclease SbcC. | DNA polymerase III beta subunit. | 0.463 |
EEX35964.1 | EEX35748.1 | VIB_002276 | VIB_002897 | Exonuclease SbcC. | Metallo-beta-lactamase family protein RNA-specific. | 0.498 |
EEX35964.1 | EEX37140.1 | VIB_002276 | VIB_001254 | Exonuclease SbcC. | ATP-dependent DNA ligase. | 0.715 |
EEX35964.1 | EEX37325.1 | VIB_002276 | VIB_001445 | Exonuclease SbcC. | DNA polymerase II. | 0.725 |
EEX35964.1 | EEX37483.1 | VIB_002276 | VIB_001608 | Exonuclease SbcC. | DNA polymerase III delta prime subunit. | 0.583 |
EEX35964.1 | polA | VIB_002276 | VIB_000051 | Exonuclease SbcC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.966 |
EEX35964.1 | xni | VIB_002276 | VIB_001760 | Exonuclease SbcC. | Probable exodeoxyribonuclease IX; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. | 0.823 |
EEX36850.1 | EEX35652.1 | VIB_000957 | VIB_003021 | Exodeoxyribonuclease III. | DNA polymerase III beta subunit. | 0.929 |
EEX36850.1 | EEX37140.1 | VIB_000957 | VIB_001254 | Exodeoxyribonuclease III. | ATP-dependent DNA ligase. | 0.912 |
EEX36850.1 | EEX37325.1 | VIB_000957 | VIB_001445 | Exodeoxyribonuclease III. | DNA polymerase II. | 0.708 |
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